Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC138965.3-201ENST00000623875 498 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 CASC19-222ENST00000641321 1173 ntBASIC5.55□□□□□ -1.52
COPAP53621 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPAP53621 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.55□□□□□ -1.52
COPAP53621 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COPAP53621 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COPAP53621 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COPAP53621 AC053481.2-202ENST00000582394 1500 ntBASIC5.54□□□□□ -1.52
COPAP53621 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 OR4F13P-202ENST00000560066 2054 ntBASIC5.54□□□□□ -1.52
COPAP53621 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 AL121886.1-201ENST00000358609 435 ntBASIC5.54□□□□□ -1.52
COPAP53621 RN7SKP74-201ENST00000362849 309 ntBASIC5.54□□□□□ -1.52
COPAP53621 RNA5SP507-201ENST00000363603 121 ntBASIC5.54□□□□□ -1.52
COPAP53621 U8.4-201ENST00000363626 134 ntBASIC5.54□□□□□ -1.52
COPAP53621 RNU6-225P-201ENST00000384613 103 ntBASIC5.54□□□□□ -1.52
COPAP53621 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.54□□□□□ -1.52
COPAP53621 AL512430.2-201ENST00000406786 339 ntBASIC5.54□□□□□ -1.52
COPAP53621 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 TCEA1P4-201ENST00000415066 844 ntBASIC5.54□□□□□ -1.52
COPAP53621 RPL23AP27-201ENST00000415161 451 ntBASIC5.54□□□□□ -1.52
COPAP53621 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 XKRYP1-201ENST00000423438 492 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC108075.1-201ENST00000424692 529 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC092648.1-201ENST00000425870 423 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC005033.1-201ENST00000428904 813 ntBASIC5.54□□□□□ -1.52
COPAP53621 XKRYP2-201ENST00000432915 492 ntBASIC5.54□□□□□ -1.52
COPAP53621 FTH1P16-201ENST00000435241 552 ntBASIC5.54□□□□□ -1.52
COPAP53621 NANOGP9-201ENST00000439890 892 ntBASIC5.54□□□□□ -1.52
COPAP53621 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.54□□□□□ -1.52
COPAP53621 AL591719.1-201ENST00000444669 744 ntBASIC5.54□□□□□ -1.52
COPAP53621 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 MTND1P31-201ENST00000449206 961 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC092155.2-201ENST00000454675 477 ntBASIC5.54□□□□□ -1.52
COPAP53621 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC096992.1-201ENST00000459808 709 ntBASIC5.54□□□□□ -1.52
COPAP53621 RN7SL329P-201ENST00000467740 299 ntBASIC5.54□□□□□ -1.52
COPAP53621 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 ATP5LP5-201ENST00000483050 299 ntBASIC5.54□□□□□ -1.52
COPAP53621 RPL15P21-201ENST00000495592 567 ntBASIC5.54□□□□□ -1.52
COPAP53621 RN7SL808P-201ENST00000496066 299 ntBASIC5.54□□□□□ -1.52
COPAP53621 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.54□□□□□ -1.52
COPAP53621 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 AC104417.1-201ENST00000523974 751 ntBASIC5.54□□□□□ -1.52
COPAP53621 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.54□□□□□ -1.52
COPAP53621 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 AC087897.1-201ENST00000550134 156 ntBASIC5.54□□□□□ -1.52
COPAP53621 HMGN2P6-201ENST00000551091 273 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 AC009852.2-201ENST00000567898 485 ntBASIC5.54□□□□□ -1.52
COPAP53621 RBM22P1-201ENST00000578589 1214 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.54□□□□□ -1.52
COPAP53621 MIR7853-201ENST00000584820 132 ntBASIC5.54□□□□□ -1.52
COPAP53621 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.54□□□□□ -1.52
COPAP53621 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 AC126915.2-201ENST00000610957 190 ntBASIC5.54□□□□□ -1.52
COPAP53621 AL035461.2-201ENST00000619201 524 ntBASIC5.54□□□□□ -1.52
COPAP53621 AC015908.5-201ENST00000623289 343 ntBASIC5.54□□□□□ -1.52
COPAP53621 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.54□□□□□ -1.52
COPAP53621 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
COPAP53621 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.54□□□□□ -1.52
COPAP53621 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
COPAP53621 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COPAP53621 TCP11X1-202ENST00000622971 1372 ntBASIC5.54□□□□□ -1.52
COPAP53621 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
COPAP53621 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 AP000756.2-201ENST00000624168 2567 ntBASIC5.53□□□□□ -1.52
COPAP53621 AC006206.1-201ENST00000544842 3387 ntBASIC5.53□□□□□ -1.52
COPAP53621 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
COPAP53621 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COPAP53621 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.53□□□□□ -1.52
COPAP53621 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COPAP53621 RNU6-236P-201ENST00000363886 106 ntBASIC5.53□□□□□ -1.52
COPAP53621 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 MCTS2P-201ENST00000394552 546 ntBASIC5.53□□□□□ -1.52
COPAP53621 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COPAP53621 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
COPAP53621 AL133388.1-201ENST00000404509 287 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms