Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AL445928.1-201ENST00000435545 222 ntBASIC6.79□□□□□ -1.32
USP11P51784 RPS7P3-201ENST00000443360 580 ntBASIC6.79□□□□□ -1.32
USP11P51784 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.79□□□□□ -1.32
USP11P51784 HMGN1P2-201ENST00000445197 310 ntBASIC6.79□□□□□ -1.32
USP11P51784 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 CDC42P1-201ENST00000456658 548 ntBASIC6.79□□□□□ -1.32
USP11P51784 AL445687.2-201ENST00000458156 728 ntBASIC6.79□□□□□ -1.32
USP11P51784 RPS20P4-201ENST00000461659 355 ntBASIC6.79□□□□□ -1.32
USP11P51784 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.79□□□□□ -1.32
USP11P51784 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC092989.1-201ENST00000481235 277 ntBASIC6.79□□□□□ -1.32
USP11P51784 AC008629.2-201ENST00000503783 483 ntBASIC6.79□□□□□ -1.32
USP11P51784 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.79□□□□□ -1.32
USP11P51784 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.79□□□□□ -1.32
USP11P51784 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.79□□□□□ -1.32
USP11P51784 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 RN7SKP141-201ENST00000516167 338 ntBASIC6.79□□□□□ -1.32
USP11P51784 RNU6-314P-201ENST00000516574 104 ntBASIC6.79□□□□□ -1.32
USP11P51784 SNORA20.3-201ENST00000516880 132 ntBASIC6.79□□□□□ -1.32
USP11P51784 AC023632.1-201ENST00000518463 375 ntBASIC6.79□□□□□ -1.32
USP11P51784 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.79□□□□□ -1.32
USP11P51784 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.79□□□□□ -1.32
USP11P51784 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USP11P51784 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.79□□□□□ -1.32
USP11P51784 AL049779.3-201ENST00000557141 606 ntBASIC6.79□□□□□ -1.32
USP11P51784 DPPA3P2-202ENST00000557188 1219 ntBASIC6.79□□□□□ -1.32
USP11P51784 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.79□□□□□ -1.32
USP11P51784 MIR4528-201ENST00000577763 90 ntBASIC6.79□□□□□ -1.32
USP11P51784 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.79□□□□□ -1.32
USP11P51784 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.79□□□□□ -1.32
USP11P51784 MIR132-201ENST00000591554 101 ntBASIC6.79□□□□□ -1.32
USP11P51784 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AL138895.2-201ENST00000603019 178 ntBASIC6.79□□□□□ -1.32
USP11P51784 AL592494.3-201ENST00000609485 464 ntBASIC6.79□□□□□ -1.32
USP11P51784 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
USP11P51784 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.79□□□□□ -1.32
USP11P51784 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.79□□□□□ -1.32
USP11P51784 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.79□□□□□ -1.32
USP11P51784 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.79□□□□□ -1.32
USP11P51784 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USP11P51784 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.79□□□□□ -1.32
USP11P51784 AC005539.1-201ENST00000443768 1479 ntBASIC6.79□□□□□ -1.32
USP11P51784 IMMTP1-201ENST00000435590 2219 ntBASIC6.78□□□□□ -1.32
USP11P51784 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 HSPD1P7-201ENST00000447985 1686 ntBASIC6.78□□□□□ -1.32
USP11P51784 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
USP11P51784 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 RN7SKP128-201ENST00000364270 303 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC016739.1-201ENST00000405359 345 ntBASIC6.78□□□□□ -1.32
USP11P51784 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 AL590002.1-201ENST00000406554 418 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.78□□□□□ -1.32
USP11P51784 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.78□□□□□ -1.32
USP11P51784 BX284632.2-201ENST00000421091 399 ntBASIC6.78□□□□□ -1.32
USP11P51784 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.78□□□□□ -1.32
USP11P51784 OR5AW1P-201ENST00000426334 1006 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC099677.3-201ENST00000427081 395 ntBASIC6.78□□□□□ -1.32
USP11P51784 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 MTND1P28-201ENST00000435623 950 ntBASIC6.78□□□□□ -1.32
USP11P51784 AL512605.1-202ENST00000441919 381 ntBASIC6.78□□□□□ -1.32
USP11P51784 AL359955.2-201ENST00000445380 353 ntBASIC6.78□□□□□ -1.32
USP11P51784 COX6CP12-201ENST00000446748 202 ntBASIC6.78□□□□□ -1.32
USP11P51784 VN1R10P-201ENST00000447106 875 ntBASIC6.78□□□□□ -1.32
USP11P51784 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USP11P51784 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.78□□□□□ -1.32
USP11P51784 ACA64.4-201ENST00000459070 127 ntBASIC6.78□□□□□ -1.32
USP11P51784 RPSAP39-201ENST00000467439 883 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.78□□□□□ -1.32
USP11P51784 AC072039.1-201ENST00000477611 581 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 AC079395.1-201ENST00000510981 262 ntBASIC6.78□□□□□ -1.32
USP11P51784 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.78□□□□□ -1.32
USP11P51784 SETP21-201ENST00000514799 892 ntBASIC6.78□□□□□ -1.32
USP11P51784 RNU6-1334P-201ENST00000516032 105 ntBASIC6.78□□□□□ -1.32
USP11P51784 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
USP11P51784 OR5AL2P-201ENST00000532185 920 ntBASIC6.78□□□□□ -1.32
USP11P51784 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms