Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC093671.1-201ENST00000624981 2929 ntBASIC5.38□□□□□ -1.55
HOXA13P31271 AC011755.1-201ENST00000623763 2049 ntBASIC5.38□□□□□ -1.55
HOXA13P31271 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA13P31271 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA13P31271 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA13P31271 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXA13P31271 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA13P31271 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA13P31271 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
HOXA13P31271 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 AL031595.2-201ENST00000624215 19071 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXA13P31271 MT-TP-201ENST00000387461 68 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXA13P31271 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 RPS4XP9-201ENST00000405151 780 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA13P31271 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA13P31271 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 ARL2BPP10-201ENST00000446487 531 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 BTF3P6-201ENST00000448054 499 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA13P31271 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA13P31271 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA13P31271 AC107015.1-201ENST00000466902 747 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA13P31271 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXA13P31271 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 RNA5SP230-201ENST00000517039 122 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 RN7SKP92-201ENST00000517266 244 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 RAB9BP1-201ENST00000519581 626 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXA13P31271 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA13P31271 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXA13P31271 AC018552.1-201ENST00000562099 811 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 AC233266.2-201ENST00000567067 528 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA13P31271 KATNBL1P5-201ENST00000605015 517 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 MIR7641-1-201ENST00000627518 61 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA13P31271 DDX18P5-201ENST00000534547 1306 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 DHX40P1-201ENST00000588725 1412 ntBASIC5.37□□□□□ -1.55
HOXA13P31271 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA13P31271 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 RAD1P1-201ENST00000231383 813 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 SNORD113.2-201ENST00000364166 89 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXA13P31271 U3.23-201ENST00000391132 200 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC104297.1-201ENST00000393779 870 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AL136131.1-201ENST00000406079 803 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 AL353692.2-201ENST00000407054 335 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 SNORA79B-201ENST00000410557 148 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 CENPIP1-201ENST00000425713 902 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 VTI1BP4-201ENST00000427516 527 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 H2AFZP5-201ENST00000446960 382 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 MTND2P6-201ENST00000455337 1030 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 SUMO1P1-201ENST00000497904 306 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 IGHV3-63-201ENST00000518422 341 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXA13P31271 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 AC090079.2-201ENST00000575289 768 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 AC098483.2-201ENST00000603158 454 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC135178.6-201ENST00000605314 398 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC005014.3-201ENST00000605985 190 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 MIR1264-201ENST00000616374 69 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AL645927.2-201ENST00000618350 349 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC015804.1-201ENST00000622935 435 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 AC020978.9-201ENST00000624380 1141 ntBASIC5.36□□□□□ -1.55
HOXA13P31271 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXA13P31271 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXA13P31271 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXA13P31271 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA13P31271 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA13P31271 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms