Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL022401.1-201ENST00000619498 108 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 RNA5SP196-201ENST00000625967 102 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 GVINP1-202ENST00000531871 7271 ntBASIC4.93□□□□□ -1.62
PDGFBP01127 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.93□□□□□ -1.62
PDGFBP01127 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PDGFBP01127 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.93□□□□□ -1.62
PDGFBP01127 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFBP01127 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFBP01127 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDGFBP01127 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 AC025031.4-201ENST00000621248 3271 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFBP01127 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 RNA5SP387-201ENST00000364226 106 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PDGFBP01127 RNU6-761P-201ENST00000384148 107 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 MTCO1P57-201ENST00000432182 261 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFBP01127 HMGB1P4-201ENST00000455362 567 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFBP01127 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.92□□□□□ -1.62
PDGFBP01127 RPL7P19-201ENST00000469948 618 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFBP01127 AC022360.1-201ENST00000521058 340 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFBP01127 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.92□□□□□ -1.62
PDGFBP01127 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFBP01127 MIR3158-1-201ENST00000583596 81 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFBP01127 AL445567.2-201ENST00000618935 498 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AP000843.1-201ENST00000624880 701 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AC112200.1-201ENST00000625015 234 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFBP01127 AL450326.2-201ENST00000421913 1962 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFBP01127 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 AC006210.2-201ENST00000367074 1545 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PDGFBP01127 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFBP01127 HSPD1P11-201ENST00000508643 1702 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 AL603750.1-201ENST00000624216 1717 ntBASIC4.92□□□□□ -1.62
PDGFBP01127 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 BTBD10P1-201ENST00000549824 1352 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PDGFBP01127 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFBP01127 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFBP01127 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFBP01127 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 MIR208A-201ENST00000362287 71 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 AMZ2P2-201ENST00000406819 1057 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 SNORA11.1-201ENST00000408133 129 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 AL356806.1-201ENST00000422524 916 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 AP001324.1-201ENST00000428553 399 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFBP01127 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 PHBP16-201ENST00000446318 950 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 AC114755.5-201ENST00000447760 831 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 RPL21P6-201ENST00000479171 504 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 RNA5SP143-201ENST00000516936 115 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 MIR2116-201ENST00000517221 80 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 IGLVIV-65-201ENST00000517313 360 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 FTH1P11-201ENST00000517577 551 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 MRPL49P2-201ENST00000521066 465 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 OR8G5-201ENST00000524943 1041 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFBP01127 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 AC025884.1-201ENST00000556034 378 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.91□□□□□ -1.62
PDGFBP01127 AL139124.1-201ENST00000609123 421 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 AL035461.2-201ENST00000619201 524 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms