Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC136428.4-201ENST00000634254 1155 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
FOXN3O00409 AC111188.2-201ENST00000529697 1387 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 AC007996.1-201ENST00000620414 2821 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.63□□□□□ -1.51
FOXN3O00409 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 AC006210.2-201ENST00000367074 1545 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.63□□□□□ -1.51
FOXN3O00409 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FOXN3O00409 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
FOXN3O00409 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 DDX18P4-201ENST00000511690 1966 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
FOXN3O00409 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
FOXN3O00409 RNA5SP132-201ENST00000364725 118 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RN7SKP81-201ENST00000365603 331 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RNU6-317P-201ENST00000384031 107 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RNA5SP187-201ENST00000384400 119 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 AL591719.1-201ENST00000444669 744 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 PTGES3P5-201ENST00000455109 434 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 RPL23AP12-201ENST00000467573 473 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RN7SL189P-201ENST00000468631 289 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AC020898.1-201ENST00000474167 787 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.62□□□□□ -1.51
FOXN3O00409 RPL7P6-201ENST00000480903 738 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RPL7P51-201ENST00000490532 749 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RN7SL447P-201ENST00000494711 245 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 MTND4LP2-201ENST00000502312 285 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 AC021146.5-201ENST00000503544 545 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC006427.1-201ENST00000514359 712 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RNU6-311P-201ENST00000516224 102 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 OR8A2P-201ENST00000528631 952 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.62□□□□□ -1.51
FOXN3O00409 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXN3O00409 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 AC234772.3-201ENST00000602277 528 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 AC099786.3-201ENST00000565735 1410 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 AL022311.1-201ENST00000623726 19416 ntBASIC5.62□□□□□ -1.51
FOXN3O00409 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
FOXN3O00409 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXN3O00409 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
FOXN3O00409 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
FOXN3O00409 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
FOXN3O00409 ANKRD36P1-201ENST00000344424 659 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 RNU6-236P-201ENST00000363886 106 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 RNA5SP90-201ENST00000364801 99 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 RNU1-149P-201ENST00000390870 161 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 RN7SKP97-201ENST00000410966 333 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXN3O00409 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXN3O00409 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXN3O00409 C1DP1-201ENST00000426049 402 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXN3O00409 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXN3O00409 AC234064.1-201ENST00000436312 247 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AL450263.2-201ENST00000439400 589 ntBASIC5.61□□□□□ -1.51
FOXN3O00409 AC245047.2-201ENST00000441060 530 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms