Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AL589647.1-201ENST00000402485 466 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RN7SKP199-201ENST00000410325 305 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AL591848.1-201ENST00000413092 322 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 OR2B7P-201ENST00000429302 934 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RPS20P1-201ENST00000434853 354 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RPL23AP37-201ENST00000479658 549 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 METTL15P1-201ENST00000481421 1045 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 NIP7P2-201ENST00000485801 544 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RN7SL214P-201ENST00000487317 265 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RPS4XP18-201ENST00000495480 763 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 ARL4AP1-201ENST00000503220 705 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC125612.1-201ENST00000547580 377 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC018552.3-201ENST00000567416 561 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC116447.1-201ENST00000613153 453 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 ASNSP1-201ENST00000518311 1939 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 DDX18P3-201ENST00000404856 2007 ntBASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC40Q9H9A6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC019155.1-201ENST00000382242 574 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 SNORA51.8-201ENST00000384234 132 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 MIR921-201ENST00000401133 56 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 RN7SKP222-201ENST00000410651 315 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 RNU6-603P-201ENST00000411403 107 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 OR51B3P-201ENST00000412287 913 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 Z68694.1-201ENST00000413929 841 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 H2AFZP5-201ENST00000446960 382 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 RPL7P16-201ENST00000479738 738 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC004453.1-201ENST00000487895 408 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 OR5M14P-201ENST00000506803 618 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC009117.1-201ENST00000563948 554 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC015912.2-201ENST00000571053 181 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC090312.1-201ENST00000580637 348 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 MIR4646-201ENST00000580775 63 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AL391358.1-201ENST00000605342 190 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AC087385.3-201ENST00000620477 187 ntBASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LRRC40Q9H9A6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC010329.2-201ENST00000595195 2737 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms