Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
SMC1BQ8NDV3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RNU4-7P-201ENST00000364758 141 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 SNORD116-12-201ENST00000384468 92 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RNA5SP332-201ENST00000391063 115 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RPS3AP37-201ENST00000419176 745 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 BMS1P19-201ENST00000433925 393 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC092473.1-201ENST00000441098 221 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 GAPDHP25-201ENST00000447061 1001 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 OR51B8P-201ENST00000449892 769 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 HSPE1P22-201ENST00000456856 327 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 BTF3P13-201ENST00000513224 490 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 OR4H6P-201ENST00000563771 921 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC009948.4-201ENST00000604692 675 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC011374.2-201ENST00000607135 526 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AL121890.3-201ENST00000618494 516 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC013470.4-201ENST00000619978 986 ntBASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMC1BQ8NDV3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC093671.1-201ENST00000624981 2929 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 RNU6-224P-201ENST00000384055 107 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 ATP5F1P2-201ENST00000398143 760 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 RPS3AP23-201ENST00000401762 784 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AL009179.1-201ENST00000406085 265 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AL365338.1-201ENST00000422282 858 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AL592437.1-201ENST00000443781 492 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 TDGF1P1-201ENST00000445734 527 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC004022.1-201ENST00000447766 1066 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC006967.1-201ENST00000467608 589 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC021205.1-201ENST00000468797 348 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC082651.2-201ENST00000496833 166 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 GTF2F2P1-201ENST00000511083 675 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC118465.1-201ENST00000513820 1271 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 CYP4F27P-201ENST00000514557 494 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AL109741.3-201ENST00000561748 592 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 MIR3160-1-201ENST00000577972 85 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC091042.1-201ENST00000579213 173 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AL049844.2-201ENST00000604280 628 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AP001521.2-201ENST00000608772 546 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 OR2BH1P-201ENST00000608850 864 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 U6.48-201ENST00000618523 106 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 MIR6830-201ENST00000636015 70 ntBASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SMC1BQ8NDV3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms