Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AL133244.1-201ENST00000456007 258 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 RPS3AP41-201ENST00000462701 778 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC012158.1-204ENST00000483430 465 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 MTND4LP2-201ENST00000502312 285 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC021146.3-201ENST00000511911 260 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 snoU109.6-201ENST00000516831 118 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 UBE2FP2-201ENST00000566646 462 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 MIR3934-201ENST00000579806 107 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 SNORD39.2-201ENST00000579995 76 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC090510.2-201ENST00000617465 629 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC091046.3-201ENST00000631455 1574 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 OR51H2P-202ENST00000641424 3046 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC015813.6-201ENST00000624409 5808 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 ASNSP1-201ENST00000518311 1939 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 VN1R54P-201ENST00000435210 1049 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AL357520.1-201ENST00000441557 453 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC073648.4-201ENST00000442655 781 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 RPL7P61-201ENST00000451721 751 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 RPS3AP53-201ENST00000454716 778 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC090151.1-201ENST00000520784 730 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC090312.1-201ENST00000580637 348 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC103792.1-201ENST00000603591 919 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC026979.4-201ENST00000606555 645 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 BMS1P21-201ENST00000634565 365 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 CASC19-222ENST00000641321 1173 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL3Q8IVW4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 KARSP3-201ENST00000571212 1504 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 RNA5SP151-201ENST00000365632 117 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 RNU1-63P-201ENST00000383902 164 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 SDHCP2-201ENST00000398565 501 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 HDGFP1-201ENST00000405943 252 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AL358176.3-201ENST00000420757 454 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC062016.2-201ENST00000420950 676 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 RAD23BP1-201ENST00000421404 1227 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC104837.2-201ENST00000427236 424 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC022431.1-201ENST00000450941 438 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 APOOP2-201ENST00000461561 539 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC011005.3-201ENST00000491624 395 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 PGBD4P4-201ENST00000509673 613 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 BRD9P1-201ENST00000529855 560 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 OR1F2P-201ENST00000570470 933 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 BNIP3P32-201ENST00000600015 554 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC008536.1-201ENST00000602872 669 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC073091.2-201ENST00000603205 907 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC233280.2-201ENST00000603917 1070 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AL133338.2-201ENST00000604292 736 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AL161912.3-201ENST00000605404 628 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AL135786.2-201ENST00000608422 615 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AP003072.5-201ENST00000623872 773 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms