Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC073143.1-201ENST00000436316 395 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 ARF4P4-201ENST00000439608 520 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RPS29P9-201ENST00000440360 171 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 CNOT7P2-201ENST00000441051 832 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 GTF3AP5-201ENST00000442645 697 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RPL34P20-201ENST00000442771 351 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 VN1R25P-201ENST00000443385 738 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 KNOP1P3-201ENST00000446933 426 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RPL31P20-201ENST00000449593 360 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC010468.1-201ENST00000461022 817 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RPS26P39-201ENST00000469206 341 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC073073.1-201ENST00000493920 463 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC134050.1-201ENST00000495088 933 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC010350.1-201ENST00000504908 231 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC093770.1-201ENST00000511559 571 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC010486.3-201ENST00000511602 785 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AP006245.2-201ENST00000522004 300 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 OR10V3P-201ENST00000525712 725 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 OR8A2P-201ENST00000528631 952 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC124283.4-201ENST00000581815 456 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 MIR4472-2-201ENST00000582069 67 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC079880.2-201ENST00000603790 1213 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AL139344.1-201ENST00000605228 195 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC015849.2-201ENST00000605738 409 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC107952.2-201ENST00000606048 486 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC004232.3-201ENST00000622977 525 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC090617.9-201ENST00000623751 147 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC079416.3-201ENST00000624479 549 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 THAP12P5-201ENST00000405864 2275 ntBASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.99□□□□□ -1.61
ZNF549Q6P9A3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 CIR1P2-201ENST00000514821 1342 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL731532.2-201ENST00000623542 1953 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC012078.1-201ENST00000405035 1646 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 ST13P16-201ENST00000401760 781 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RN7SKP97-201ENST00000410966 333 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 UBE2V1P9-201ENST00000414760 368 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RPS24P7-201ENST00000416921 246 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC009518.2-201ENST00000418056 731 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 MTCO3P4-201ENST00000419236 787 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC010099.3-201ENST00000423896 409 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 USP9YP24-201ENST00000434374 697 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 USP9YP17-201ENST00000444617 696 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 TCEA1P1-201ENST00000449716 880 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RPL7P55-201ENST00000450522 746 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 IGHV5-78-201ENST00000450948 295 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RN7SL172P-201ENST00000460535 303 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RPS17P11-201ENST00000474297 293 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC079841.1-201ENST00000481228 950 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC023424.1-201ENST00000496058 459 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC138409.2-202ENST00000507274 458 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC113420.1-201ENST00000507903 571 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms