Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK2P53671 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK2P53671 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LIMK2P53671 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 AP000542.2-201ENST00000623199 6179 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LIMK2P53671 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 AC104297.1-201ENST00000393779 870 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 RPL5P19-201ENST00000404228 893 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 ARL4AP5-201ENST00000404372 599 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 RNU2-50P-201ENST00000410494 143 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 AC093084.1-201ENST00000424233 687 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 MTND4LP13-201ENST00000425022 298 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 AL513533.1-201ENST00000453728 415 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 LARP7P4-201ENST00000481075 878 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 RWDD4P1-201ENST00000488019 565 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 CEACAMP10-202ENST00000495431 496 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 OR51K1P-201ENST00000510214 950 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 IGKV1-32-201ENST00000519290 311 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 SNRPGP1-201ENST00000553864 222 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 AC079075.1-201ENST00000559543 878 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 AC092868.3-201ENST00000560515 784 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.81□□□□□ -1.64
LIMK2P53671 TMF1P1-201ENST00000576058 373 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 AC234771.5-201ENST00000600161 514 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 AL391358.1-201ENST00000605342 190 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.81□□□□□ -1.64
LIMK2P53671 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 AL445487.1-201ENST00000415694 1580 ntBASIC4.81□□□□□ -1.64
LIMK2P53671 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
LIMK2P53671 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.81□□□□□ -1.64
LIMK2P53671 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK2P53671 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 AC099654.2-201ENST00000433031 1980 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 AC136624.1-201ENST00000400791 413 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 RNA5SP113-201ENST00000410486 84 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 GTF2IP5-201ENST00000414608 731 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK2P53671 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.8□□□□□ -1.64
LIMK2P53671 AC011753.3-201ENST00000443436 406 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK2P53671 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 AC104651.2-201ENST00000447549 528 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK2P53671 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK2P53671 AC008897.1-201ENST00000494006 347 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK2P53671 SNORA26.10-201ENST00000516427 141 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.8□□□□□ -1.64
LIMK2P53671 FKBP1BP1-201ENST00000553366 325 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.8□□□□□ -1.64
LIMK2P53671 AC122134.1-201ENST00000565664 1104 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK2P53671 KATNBL1P1-201ENST00000605192 748 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AL121932.1-201ENST00000605542 214 ntBASIC4.8□□□□□ -1.64
LIMK2P53671 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms