Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
LHX1P48742 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 AC107068.1-201ENST00000563286 4218 ntBASIC5.03□□□□□ -1.6
LHX1P48742 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 RN7SKP115-201ENST00000363177 317 ntBASIC5.03□□□□□ -1.6
LHX1P48742 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX1P48742 MT-TP-201ENST00000387461 68 ntBASIC5.03□□□□□ -1.6
LHX1P48742 RN7SKP106-201ENST00000410832 272 ntBASIC5.03□□□□□ -1.6
LHX1P48742 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX1P48742 ATG4AP1-201ENST00000416893 538 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC140479.3-201ENST00000418944 1126 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC092570.3-201ENST00000420113 693 ntBASIC5.03□□□□□ -1.6
LHX1P48742 EIF4HP2-201ENST00000424380 563 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 GTF3AP5-201ENST00000442645 697 ntBASIC5.03□□□□□ -1.6
LHX1P48742 CEACAMP9-201ENST00000442990 513 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 AC079168.2-201ENST00000453977 416 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC025164.1-201ENST00000496249 478 ntBASIC5.03□□□□□ -1.6
LHX1P48742 MTND3P24-201ENST00000506306 329 ntBASIC5.03□□□□□ -1.6
LHX1P48742 RNA5SP228-201ENST00000516232 133 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LHX1P48742 AC068993.1-201ENST00000546724 589 ntBASIC5.03□□□□□ -1.6
LHX1P48742 FKBP1BP1-201ENST00000553366 325 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX1P48742 MIR4330-201ENST00000579077 105 ntBASIC5.03□□□□□ -1.6
LHX1P48742 MTCO3P22-201ENST00000603219 784 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AL096803.3-201ENST00000609032 532 ntBASIC5.03□□□□□ -1.6
LHX1P48742 AC021106.3-201ENST00000623925 531 ntBASIC5.03□□□□□ -1.6
LHX1P48742 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX1P48742 AC110792.3-201ENST00000595906 1614 ntBASIC5.03□□□□□ -1.6
LHX1P48742 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LHX1P48742 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LHX1P48742 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX1P48742 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX1P48742 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.03□□□□□ -1.6
LHX1P48742 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX1P48742 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX1P48742 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX1P48742 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.02□□□□□ -1.61
LHX1P48742 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LHX1P48742 OR4K15-201ENST00000305051 1216 ntBASIC5.02□□□□□ -1.61
LHX1P48742 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.02□□□□□ -1.61
LHX1P48742 Y_RNA.110-201ENST00000363220 99 ntBASIC5.02□□□□□ -1.61
LHX1P48742 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.02□□□□□ -1.61
LHX1P48742 RNU6-398P-201ENST00000384143 109 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC104297.1-201ENST00000393779 870 ntBASIC5.02□□□□□ -1.61
LHX1P48742 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX1P48742 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX1P48742 RPL26P29-201ENST00000415623 438 ntBASIC5.02□□□□□ -1.61
LHX1P48742 E2F6P2-201ENST00000420708 748 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC004938.1-201ENST00000438468 308 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC007000.2-201ENST00000442564 487 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC011753.3-201ENST00000443436 406 ntBASIC5.02□□□□□ -1.61
LHX1P48742 MRPL48P1-201ENST00000445390 636 ntBASIC5.02□□□□□ -1.61
LHX1P48742 MTND2P30-201ENST00000456663 382 ntBASIC5.02□□□□□ -1.61
LHX1P48742 RPS29P33-201ENST00000456717 146 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.02□□□□□ -1.61
LHX1P48742 CABYRP1-201ENST00000465493 1045 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC090142.1-201ENST00000465776 462 ntBASIC5.02□□□□□ -1.61
LHX1P48742 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX1P48742 RPL12P20-201ENST00000475538 479 ntBASIC5.02□□□□□ -1.61
LHX1P48742 COX6B1P2-201ENST00000489624 230 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC008897.1-201ENST00000494006 347 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX1P48742 AC025768.1-201ENST00000510057 267 ntBASIC5.02□□□□□ -1.61
LHX1P48742 RNU6-467P-201ENST00000517027 110 ntBASIC5.02□□□□□ -1.61
LHX1P48742 MTCYBP19-201ENST00000517463 1124 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.02□□□□□ -1.61
LHX1P48742 OR5M2P-201ENST00000529003 936 ntBASIC5.02□□□□□ -1.61
LHX1P48742 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.02□□□□□ -1.61
LHX1P48742 NOP56P3-201ENST00000549457 385 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX1P48742 AL359219.2-201ENST00000555184 348 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC027176.2-201ENST00000559166 746 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.02□□□□□ -1.61
LHX1P48742 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX1P48742 AC005242.1-201ENST00000585658 438 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC068020.1-201ENST00000594215 661 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC006272.2-201ENST00000594725 163 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC130352.1-201ENST00000602979 661 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC073137.1-201ENST00000605636 634 ntBASIC5.02□□□□□ -1.61
LHX1P48742 AC005972.3-201ENST00000606304 481 ntBASIC5.02□□□□□ -1.61
LHX1P48742 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LHX1P48742 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX1P48742 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms