Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CTSDP07339 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 RNA5SP502-201ENST00000362694 119 ntBASIC3.76□□□□□ -1.81
CTSDP07339 RNA5SP307-201ENST00000362863 116 ntBASIC3.76□□□□□ -1.81
CTSDP07339 SNORD74.4-201ENST00000364129 80 ntBASIC3.76□□□□□ -1.81
CTSDP07339 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 AC019155.1-201ENST00000382242 574 ntBASIC3.76□□□□□ -1.81
CTSDP07339 MIR137-201ENST00000385223 102 ntBASIC3.76□□□□□ -1.81
CTSDP07339 MIR513A2-201ENST00000385249 127 ntBASIC3.76□□□□□ -1.81
CTSDP07339 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 CHMP1B2P-201ENST00000399581 597 ntBASIC3.76□□□□□ -1.81
CTSDP07339 RPL23AP48-201ENST00000406913 488 ntBASIC3.76□□□□□ -1.81
CTSDP07339 RN7SKP278-201ENST00000410504 342 ntBASIC3.76□□□□□ -1.81
CTSDP07339 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AC004552.1-201ENST00000419089 348 ntBASIC3.76□□□□□ -1.81
CTSDP07339 PRELID3BP10-201ENST00000431957 584 ntBASIC3.76□□□□□ -1.81
CTSDP07339 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 SEPT14P1-201ENST00000458703 648 ntBASIC3.76□□□□□ -1.81
CTSDP07339 RPS26P3-201ENST00000470205 348 ntBASIC3.76□□□□□ -1.81
CTSDP07339 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CTSDP07339 RPL7AP6-201ENST00000477943 801 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AC090543.2-201ENST00000483963 348 ntBASIC3.76□□□□□ -1.81
CTSDP07339 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 AC004057.1-201ENST00000485827 348 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AC008638.1-201ENST00000506035 866 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 NDUFB4P12-201ENST00000513465 390 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 AC016180.1-201ENST00000567945 403 ntBASIC3.76□□□□□ -1.81
CTSDP07339 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.76□□□□□ -1.81
CTSDP07339 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.76□□□□□ -1.81
CTSDP07339 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CTSDP07339 AC007546.2-201ENST00000623996 360 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AL356121.2-201ENST00000624715 780 ntBASIC3.76□□□□□ -1.81
CTSDP07339 BMS1P21-201ENST00000634565 365 ntBASIC3.76□□□□□ -1.81
CTSDP07339 AC097504.1-201ENST00000515103 2415 ntBASIC3.76□□□□□ -1.81
CTSDP07339 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.76□□□□□ -1.81
CTSDP07339 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.76□□□□□ -1.81
CTSDP07339 AC139769.1-204ENST00000472297 1931 ntBASIC3.76□□□□□ -1.81
CTSDP07339 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CTSDP07339 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CTSDP07339 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.75□□□□□ -1.81
CTSDP07339 AC015813.6-201ENST00000624409 5808 ntBASIC3.75□□□□□ -1.81
CTSDP07339 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.75□□□□□ -1.81
CTSDP07339 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CTSDP07339 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 MIR105-2-201ENST00000385083 81 ntBASIC3.75□□□□□ -1.81
CTSDP07339 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.75□□□□□ -1.81
CTSDP07339 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
CTSDP07339 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.75□□□□□ -1.81
CTSDP07339 SNORA74C-2-201ENST00000411179 201 ntBASIC3.75□□□□□ -1.81
CTSDP07339 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CTSDP07339 RPS23P10-201ENST00000416185 486 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.75□□□□□ -1.81
CTSDP07339 RAD23BP1-201ENST00000421404 1227 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.75□□□□□ -1.81
CTSDP07339 RBMY2QP-201ENST00000429799 1147 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC097523.2-201ENST00000435551 652 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC108463.1-201ENST00000450258 347 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC010733.1-201ENST00000451515 401 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC079804.1-201ENST00000461922 436 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC093270.2-201ENST00000486157 792 ntBASIC3.75□□□□□ -1.81
CTSDP07339 RPL36AP41-201ENST00000493820 306 ntBASIC3.75□□□□□ -1.81
CTSDP07339 RN7SL808P-201ENST00000496066 299 ntBASIC3.75□□□□□ -1.81
CTSDP07339 GAPDHP56-201ENST00000506031 988 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTSDP07339 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.75□□□□□ -1.81
CTSDP07339 IGHV3-63-201ENST00000518422 341 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC090281.1-201ENST00000523019 276 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.75□□□□□ -1.81
CTSDP07339 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.75□□□□□ -1.81
CTSDP07339 MORF4L1P3-201ENST00000525966 950 ntBASIC3.75□□□□□ -1.81
CTSDP07339 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.75□□□□□ -1.81
CTSDP07339 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms