Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM1O00151 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDLIM1O00151 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PDLIM1O00151 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PDLIM1O00151 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 RNU6-152P-201ENST00000384037 107 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 AL136116.2-201ENST00000404020 785 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 DUTP5-201ENST00000406790 469 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 RN7SKP216-201ENST00000411050 312 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 RN7SKP273-201ENST00000411392 314 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 BMS1P13-201ENST00000417301 885 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 EI24P4-201ENST00000423683 1078 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 YWHAEP5-201ENST00000431545 765 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 ARL5AP3-201ENST00000439327 386 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 AC114878.1-201ENST00000441166 358 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 RPL7P33-201ENST00000444159 742 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 AL389915.2-201ENST00000454576 441 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 RN7SL443P-201ENST00000464331 290 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 AC106872.2-201ENST00000494303 480 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 HAUS1P1-201ENST00000505275 832 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.64□□□□□ -1.67
PDLIM1O00151 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.64□□□□□ -1.67
PDLIM1O00151 AC087477.6-201ENST00000559595 843 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 FAM106CP-201ENST00000582212 507 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 HMGB1P51-201ENST00000605166 638 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 AC084036.1-201ENST00000609190 508 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 AC004825.2-201ENST00000616634 455 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 RMST_5.1-201ENST00000618704 126 ntBASIC4.64□□□□□ -1.67
PDLIM1O00151 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PDLIM1O00151 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDLIM1O00151 AC093311.1-201ENST00000506586 2021 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 NXF4-202ENST00000416098 1465 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM1O00151 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
PDLIM1O00151 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM1O00151 SNORA17.1-201ENST00000362945 126 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 RNU1-43P-201ENST00000365052 165 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM1O00151 ST13P16-201ENST00000401760 781 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.63□□□□□ -1.67
PDLIM1O00151 CYP4F29P-201ENST00000420685 446 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM1O00151 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 BX323845.1-201ENST00000432417 179 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 RPS6P12-201ENST00000432491 726 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 MORF4L1P4-201ENST00000450245 976 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 HMGB1P4-201ENST00000455362 567 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 EIF2S2P4-201ENST00000461070 984 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AC005532.2-201ENST00000467154 373 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 SNRPCP2-201ENST00000504370 475 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AC008638.1-201ENST00000506035 866 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AL592156.1-201ENST00000508758 304 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 PPBPP1-201ENST00000510807 373 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.63□□□□□ -1.67
PDLIM1O00151 HNRNPKP5-201ENST00000515300 253 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 RNA5SP92-201ENST00000516437 110 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC134349.2-201ENST00000535136 910 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM1O00151 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC107016.1-201ENST00000550463 337 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AC079075.1-201ENST00000559543 878 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM1O00151 AC239803.2-201ENST00000610161 430 ntBASIC4.63□□□□□ -1.67
PDLIM1O00151 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms