Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AL590240.1-201ENST00000334118 313 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 RNA5SP507-201ENST00000363603 121 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 SNORA71.2-201ENST00000364941 134 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 RN7SKP247-201ENST00000411094 308 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 RN7SKP100-201ENST00000411258 284 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 COX6B1P1-201ENST00000415962 213 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 BX510359.2-201ENST00000417920 305 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 GTF2IP2-201ENST00000424290 697 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 RPS12P10-201ENST00000427031 377 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 PRELID3BP10-201ENST00000431957 584 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 RPL23AP93-201ENST00000440847 484 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC008410.1-201ENST00000483777 339 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 CYP4A43P-201ENST00000568156 121 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 MIR3667-201ENST00000581025 74 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 MIR4443-201ENST00000585052 53 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AL512782.1-201ENST00000603093 364 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC087385.3-201ENST00000620477 187 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 OR2L1P-202ENST00000641567 1023 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 VN2R3P-201ENST00000422626 1412 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 AC092111.2-201ENST00000611627 1414 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 CR383656.5-201ENST00000547616 1340 ntBASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TRIM49D1C9J1S8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 MAPK10-304ENST00000641341 3984 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 SNORA58B-201ENST00000364259 136 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AC007068.1-201ENST00000396690 844 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 VDAC2P1-201ENST00000399358 958 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 OR1F12-201ENST00000402365 945 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL23AP27-201ENST00000415161 451 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AC007394.1-201ENST00000421941 531 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 ARAFP1-201ENST00000422172 605 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 YY1P1-201ENST00000427625 668 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 VN1R96P-201ENST00000446052 858 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 MTND6P5-201ENST00000448266 512 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL7P16-201ENST00000479738 738 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL32P9-201ENST00000487963 407 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RN7SL808P-201ENST00000496066 299 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 HMGN2P6-201ENST00000551091 273 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AC098935.2-201ENST00000604222 466 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AL445222.1-201ENST00000607259 628 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 AL031666.3-201ENST00000609320 1006 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 MIR7155-201ENST00000615925 56 ntBASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM49D1C9J1S8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms