Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC013429.2-201ENST00000418798 781 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 RPL23AP33-201ENST00000442301 452 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AL606490.1-201ENST00000452266 765 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 CYCSP34-201ENST00000458172 304 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 RN7SL254P-201ENST00000460609 284 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC022215.1-201ENST00000481770 362 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC112518.2-201ENST00000508565 425 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC131935.1-201ENST00000524621 333 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AP003168.1-201ENST00000530091 307 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 CENPUP2-201ENST00000555897 1186 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC095057.3-201ENST00000567102 1157 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 TAS2R6P-201ENST00000605022 826 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC026741.1-201ENST00000605892 482 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AL512506.1-201ENST00000613918 449 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC108359.1-201ENST00000616451 1211 ntBASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P1B2RPK0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC083899.2-201ENST00000423285 1376 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 OR4K17-201ENST00000315543 1032 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 SNORA51.9-201ENST00000384295 124 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 MIR130B-202ENST00000385018 82 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 USP9YP19-201ENST00000412165 485 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AL359885.1-201ENST00000415786 903 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC079168.1-201ENST00000458741 345 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC098847.1-201ENST00000473094 348 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 RPS27P23-201ENST00000487608 251 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC134698.1-201ENST00000511619 643 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 MTND6P2-201ENST00000512226 524 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 MTND2P31-201ENST00000512602 616 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 FTH1P9-201ENST00000513251 355 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC018797.3-201ENST00000513388 1241 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC027308.1-201ENST00000517993 110 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 RN7SL622P-201ENST00000585292 275 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AL078624.2-201ENST00000605063 554 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 AL356094.1-201ENST00000624663 1212 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 TLK1P1-201ENST00000456760 2440 ntBASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
HMGB1P1B2RPK0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.34□□□□□ -1.55
HMGB1P1B2RPK0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms