Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 VPS26BP1-201ENST00000417155 755 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 OR6K4P-201ENST00000423179 955 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RPS29P9-201ENST00000440360 171 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 PCNPP2-201ENST00000441651 455 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 TCEA1P1-201ENST00000449716 880 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-599P-201ENST00000459383 107 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-1193P-201ENST00000459461 107 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 MTCO2P6-201ENST00000463134 685 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SL799P-201ENST00000475891 298 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RPS4XP6-201ENST00000477670 797 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC023424.1-201ENST00000496058 459 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RPL21P131-201ENST00000497298 483 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC024558.1-201ENST00000505008 528 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 HMGB3P16-201ENST00000508037 287 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC093752.1-206ENST00000511823 336 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 ENPP7P9-201ENST00000514456 627 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNA5SP303-201ENST00000516192 130 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-311P-201ENST00000516224 102 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC027308.1-201ENST00000517993 110 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 MORF4L1P3-201ENST00000525966 950 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 OR5AK3P-201ENST00000527486 1297 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC022022.2-201ENST00000602989 360 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AL135786.2-201ENST00000608422 615 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC073569.3-201ENST00000619055 682 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 Z99129.2-201ENST00000619967 314 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-368P-201ENST00000620928 107 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-538P-201ENST00000622329 107 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC004232.3-201ENST00000622977 525 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AP002505.2-201ENST00000623585 696 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AP000676.4-201ENST00000624659 623 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 CASC19-264ENST00000641912 1184 ntBASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.1□□□□□ -1.59
TCRBV7S3A2A0A539 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP162-201ENST00000363605 345 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RN7SKP186-201ENST00000365371 303 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RNU6-532P-201ENST00000384318 107 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AF228730.1-201ENST00000397972 663 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 GAPDHP15-201ENST00000398586 975 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 OR3A2-201ENST00000408891 1076 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RNA5SP498-201ENST00000411342 120 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC092648.1-201ENST00000425870 423 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 ARAFP2-201ENST00000440565 559 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 RPL34P20-201ENST00000442771 351 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 SPRYD7P1-201ENST00000443861 570 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 TRY2P-201ENST00000448860 689 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 IGHV5-78-201ENST00000450948 295 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC090686.1-201ENST00000481577 749 ntBASIC5.09□□□□□ -1.59
TCRBV7S3A2A0A539 AC091544.1-201ENST00000484702 348 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms