Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gm5538W4VSP6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm5538W4VSP6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm5538W4VSP6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm5538W4VSP6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm5538W4VSP6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm5538W4VSP6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Mir7071-201ENSMUST00000184847 69 ntBASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm5538W4VSP6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Gm5538W4VSP6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Gm5538W4VSP6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm5538W4VSP6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5538W4VSP6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm5538W4VSP6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Gm44450-201ENSMUST00000199528 114 ntBASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Gm18032-201ENSMUST00000222541 538 ntBASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm5538W4VSP6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17■□□□□ 0.31
Gm5538W4VSP6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Gm26039-201ENSMUST00000158152 144 ntBASIC17■□□□□ 0.31
Gm5538W4VSP6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Gm5538W4VSP6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm5538W4VSP6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.99■□□□□ 0.31
Gm5538W4VSP6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.98■□□□□ 0.31
Gm5538W4VSP6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms