Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Gm20760-201ENSMUST00000179197 648 ntBASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Gm10698-201ENSMUST00000182663 604 ntBASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb3S4R1G7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
H2afb3S4R1G7 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Gm12085-201ENSMUST00000119263 940 ntBASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H2afb3S4R1G7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.96□□□□□ -0.01
H2afb3S4R1G7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms