Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Gm13168-201ENSMUST00000121771 632 ntBASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Crlf3Q9Z2L7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Crlf3Q9Z2L7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Gm27275-201ENSMUST00000184318 272 ntBASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Gm10138-203ENSMUST00000206952 366 ntBASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Crlf3Q9Z2L7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Gm12896-201ENSMUST00000118430 226 ntBASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Crlf3Q9Z2L7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Crlf3Q9Z2L7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.86■□□□□ 0.29
Crlf3Q9Z2L7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms