Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Gm12933-201ENSMUST00000120203 872 ntBASIC17.3■□□□□ 0.36
Snx1Q9WV80 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.3■□□□□ 0.36
Snx1Q9WV80 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Snx1Q9WV80 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx1Q9WV80 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Gm18025-201ENSMUST00000221733 862 ntBASIC17.29■□□□□ 0.36
Snx1Q9WV80 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Snx1Q9WV80 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Gm4974-201ENSMUST00000209974 875 ntBASIC17.28■□□□□ 0.36
Snx1Q9WV80 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snx1Q9WV80 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx1Q9WV80 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.27■□□□□ 0.36
Snx1Q9WV80 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Gm13158-201ENSMUST00000122007 736 ntBASIC17.27■□□□□ 0.36
Snx1Q9WV80 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snx1Q9WV80 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Snx1Q9WV80 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.27■□□□□ 0.35
Snx1Q9WV80 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx1Q9WV80 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms