Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.01□□□□□ -0.33
CcsQ9WU84 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CcsQ9WU84 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CcsQ9WU84 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13□□□□□ -0.33
CcsQ9WU84 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CcsQ9WU84 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CcsQ9WU84 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13□□□□□ -0.33
CcsQ9WU84 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13□□□□□ -0.33
CcsQ9WU84 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CcsQ9WU84 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13□□□□□ -0.33
CcsQ9WU84 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CcsQ9WU84 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.99□□□□□ -0.33
CcsQ9WU84 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.99□□□□□ -0.33
CcsQ9WU84 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.99□□□□□ -0.33
CcsQ9WU84 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CcsQ9WU84 Gm20760-201ENSMUST00000179197 648 ntBASIC12.99□□□□□ -0.33
CcsQ9WU84 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.99□□□□□ -0.33
CcsQ9WU84 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CcsQ9WU84 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.99□□□□□ -0.33
CcsQ9WU84 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CcsQ9WU84 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CcsQ9WU84 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CcsQ9WU84 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.98□□□□□ -0.33
CcsQ9WU84 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CcsQ9WU84 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.98□□□□□ -0.33
CcsQ9WU84 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CcsQ9WU84 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.98□□□□□ -0.33
CcsQ9WU84 Gm12527-201ENSMUST00000117967 564 ntBASIC12.98□□□□□ -0.33
CcsQ9WU84 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.98□□□□□ -0.33
CcsQ9WU84 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.98□□□□□ -0.33
CcsQ9WU84 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.98□□□□□ -0.33
CcsQ9WU84 Gm20049-201ENSMUST00000219950 730 ntBASIC12.98□□□□□ -0.33
CcsQ9WU84 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.98□□□□□ -0.33
CcsQ9WU84 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CcsQ9WU84 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CcsQ9WU84 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms