Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfwd2Q9R1A8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Gm18666-201ENSMUST00000190039 958 ntBASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.2■□□□□ 0.34
Rfwd2Q9R1A8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Gm42545-201ENSMUST00000202755 922 ntBASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfwd2Q9R1A8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfwd2Q9R1A8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Gm6576-201ENSMUST00000169678 883 ntBASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd2Q9R1A8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd2Q9R1A8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd2Q9R1A8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms