Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1aQ9QWF0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1aQ9QWF0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Chaf1aQ9QWF0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chaf1aQ9QWF0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chaf1aQ9QWF0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chaf1aQ9QWF0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chaf1aQ9QWF0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Gm12085-201ENSMUST00000119263 940 ntBASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1aQ9QWF0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Gm15378-201ENSMUST00000121894 207 ntBASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1aQ9QWF0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1aQ9QWF0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms