Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Gm6420-201ENSMUST00000193885 723 ntBASIC16.09■□□□□ 0.17
Ube4bQ9ES00 AV356131-201ENSMUST00000206201 750 ntBASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ube4bQ9ES00 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ube4bQ9ES00 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ube4bQ9ES00 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Nespas-201ENSMUST00000143738 1083 ntBASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ube4bQ9ES00 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ube4bQ9ES00 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Ube4bQ9ES00 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms