Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm12895-201ENSMUST00000122214 226 ntBASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim54Q9ERP3 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.02■□□□□ 0.48
Trim54Q9ERP3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim54Q9ERP3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim54Q9ERP3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim54Q9ERP3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim54Q9ERP3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim54Q9ERP3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim54Q9ERP3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18■□□□□ 0.47
Trim54Q9ERP3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim54Q9ERP3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim54Q9ERP3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Mzt1-203ENSMUST00000227948 952 ntBASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim54Q9ERP3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim54Q9ERP3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim54Q9ERP3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim54Q9ERP3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms