Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.68■□□□□ 0.26
Vps35Q9EQH3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps35Q9EQH3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps35Q9EQH3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vps35Q9EQH3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps35Q9EQH3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vps35Q9EQH3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps35Q9EQH3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms