Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Hmgn3Q9DCB1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgn3Q9DCB1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Gm18671-201ENSMUST00000214826 683 ntBASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgn3Q9DCB1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgn3Q9DCB1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Hmgn3Q9DCB1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgn3Q9DCB1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgn3Q9DCB1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Gm7514-201ENSMUST00000209475 934 ntBASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Gm5874-201ENSMUST00000096101 508 ntBASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hmgn3Q9DCB1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Gm42642-201ENSMUST00000200683 355 ntBASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hmgn3Q9DCB1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Prob1-201ENSMUST00000097619 3021 ntBASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Gm11643-201ENSMUST00000119578 864 ntBASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hmgn3Q9DCB1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms