Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sh2d4aQ9D7V1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Sh2d4aQ9D7V1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sh2d4aQ9D7V1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Gm42545-201ENSMUST00000202755 922 ntBASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sh2d4aQ9D7V1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Gm4974-201ENSMUST00000209974 875 ntBASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh2d4aQ9D7V1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh2d4aQ9D7V1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms