Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tubgcp4Q9D4F8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tubgcp4Q9D4F8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tubgcp4Q9D4F8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tubgcp4Q9D4F8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Gm17807-201ENSMUST00000186869 298 ntBASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tubgcp4Q9D4F8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Gm15794-201ENSMUST00000120182 631 ntBASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Olfr129-201ENSMUST00000122318 993 ntBASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Gm29707-201ENSMUST00000196325 491 ntBASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubgcp4Q9D4F8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubgcp4Q9D4F8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms