Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Upk1aQ9D132 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.84■□□□□ 0.13
Upk1aQ9D132 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Upk1aQ9D132 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Gm20049-201ENSMUST00000219950 730 ntBASIC15.83■□□□□ 0.12
Upk1aQ9D132 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.83■□□□□ 0.12
Upk1aQ9D132 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Gm37292-201ENSMUST00000192062 758 ntBASIC15.82■□□□□ 0.12
Upk1aQ9D132 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upk1aQ9D132 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Gm10517-202ENSMUST00000192970 758 ntBASIC15.81■□□□□ 0.12
Upk1aQ9D132 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.81■□□□□ 0.12
Upk1aQ9D132 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.81■□□□□ 0.12
Upk1aQ9D132 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.8■□□□□ 0.12
Upk1aQ9D132 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Upk1aQ9D132 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk1aQ9D132 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk1aQ9D132 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upk1aQ9D132 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.79■□□□□ 0.12
Upk1aQ9D132 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk1aQ9D132 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms