Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Mir6349-201ENSMUST00000184059 97 ntBASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chaf1bQ9D0N7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chaf1bQ9D0N7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Gm10138-203ENSMUST00000206952 366 ntBASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Chaf1bQ9D0N7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Mir5133-201ENSMUST00000174955 77 ntBASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1bQ9D0N7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms