Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gm18115-201ENSMUST00000221209 621 ntBASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC8.94□□□□□ -0.98
Sec61bQ9CQS8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gm24589-201ENSMUST00000116692 94 ntBASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gm38116-201ENSMUST00000193873 1533 ntBASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Fst-202ENSMUST00000223640 2612 ntBASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Sec61bQ9CQS8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms