Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Gm5186-201ENSMUST00000218781 920 ntBASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.87■□□□□ 0.61
Pcdh15Q99PJ1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh15Q99PJ1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh15Q99PJ1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm13597-201ENSMUST00000121239 375 ntBASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm27300-201ENSMUST00000184085 97 ntBASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm27335-201ENSMUST00000184758 97 ntBASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm17968-201ENSMUST00000194902 784 ntBASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdh15Q99PJ1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh15Q99PJ1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh15Q99PJ1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh15Q99PJ1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh15Q99PJ1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh15Q99PJ1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdh15Q99PJ1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh15Q99PJ1 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.83■□□□□ 0.6
Pcdh15Q99PJ1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh15Q99PJ1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh15Q99PJ1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh15Q99PJ1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm13616-201ENSMUST00000120600 222 ntBASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gm8396-201ENSMUST00000057361 823 ntBASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh15Q99PJ1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms