Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rtn4rQ99PI8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Gm23634-201ENSMUST00000175071 91 ntBASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rtn4rQ99PI8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rtn4rQ99PI8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Rtn4rQ99PI8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Rtn4rQ99PI8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Rtn4rQ99PI8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rtn4rQ99PI8 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.71□□□□□ -0.06
Rtn4rQ99PI8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Gm27389-201ENSMUST00000183622 195 ntBASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Phf7-203ENSMUST00000226565 1971 ntBASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rtn4rQ99PI8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gm13186-201ENSMUST00000118031 316 ntBASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rtn4rQ99PI8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.68□□□□□ -0.06
Rtn4rQ99PI8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms