Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lysmd3Q99LE3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Gm44450-201ENSMUST00000199528 114 ntBASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lysmd3Q99LE3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lysmd3Q99LE3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lysmd3Q99LE3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.27■□□□□ 0.36
Lysmd3Q99LE3 Ank2-226ENSMUST00000189368 339 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms