Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Gm17917-201ENSMUST00000218561 953 ntBASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Gm42535-201ENSMUST00000197312 1399 ntBASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb20Q91XZ9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gm33142-201ENSMUST00000193913 867 ntBASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gm10478-201ENSMUST00000084451 396 ntBASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb20Q91XZ9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 AC125539.1-201ENSMUST00000227423 622 ntBASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms