Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga11Q91XY8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Odf3b-204ENSMUST00000227834 930 ntBASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga11Q91XY8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga11Q91XY8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga11Q91XY8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga11Q91XY8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga11Q91XY8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga11Q91XY8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms