Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tram1Q91V04 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Tram1Q91V04 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.38□□□□□ -0.11
Tram1Q91V04 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tram1Q91V04 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.38□□□□□ -0.11
Tram1Q91V04 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.38□□□□□ -0.11
Tram1Q91V04 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Gm10493-201ENSMUST00000097270 612 ntBASIC14.38□□□□□ -0.11
Tram1Q91V04 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Tram1Q91V04 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tram1Q91V04 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.38□□□□□ -0.11
Tram1Q91V04 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tram1Q91V04 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.37□□□□□ -0.11
Tram1Q91V04 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.37□□□□□ -0.11
Tram1Q91V04 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tram1Q91V04 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Tram1Q91V04 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tram1Q91V04 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tram1Q91V04 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tram1Q91V04 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tram1Q91V04 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tram1Q91V04 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Tram1Q91V04 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tram1Q91V04 Gm7290-201ENSMUST00000104990 617 ntBASIC14.36□□□□□ -0.11
Tram1Q91V04 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tram1Q91V04 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Tram1Q91V04 Gm12918-201ENSMUST00000120234 636 ntBASIC14.36□□□□□ -0.11
Tram1Q91V04 Gm15710-201ENSMUST00000121821 636 ntBASIC14.36□□□□□ -0.11
Tram1Q91V04 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tram1Q91V04 Gm5075-201ENSMUST00000196916 622 ntBASIC14.36□□□□□ -0.11
Tram1Q91V04 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms