Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Gm12896-201ENSMUST00000118430 226 ntBASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Dio3-201ENSMUST00000097228 1449 ntBASIC16.11■□□□□ 0.17
Pcdh18Q8VHR0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Mir6349-201ENSMUST00000184059 97 ntBASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Gm10138-203ENSMUST00000206952 366 ntBASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdh18Q8VHR0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh18Q8VHR0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh18Q8VHR0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh18Q8VHR0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh18Q8VHR0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
Pcdh18Q8VHR0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh18Q8VHR0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms