Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Gm9103-201ENSMUST00000119371 405 ntBASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ndc1Q8VCB1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ndc1Q8VCB1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Mir770-201ENSMUST00000103252 94 ntBASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Gm11950-201ENSMUST00000121615 838 ntBASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Gm6623-201ENSMUST00000173570 544 ntBASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.72■□□□□ 0.11
Ndc1Q8VCB1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ndc1Q8VCB1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ndc1Q8VCB1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ndc1Q8VCB1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms