Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chrna3Q8R4G9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chrna3Q8R4G9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chrna3Q8R4G9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chrna3Q8R4G9 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chrna3Q8R4G9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Gm21362-201ENSMUST00000194272 928 ntBASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chrna3Q8R4G9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chrna3Q8R4G9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms