Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Gm13216-201ENSMUST00000117145 591 ntBASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Gm16061-201ENSMUST00000122167 857 ntBASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim29Q8R2Q0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim29Q8R2Q0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Trim29Q8R2Q0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Mir7071-201ENSMUST00000184847 69 ntBASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim29Q8R2Q0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim29Q8R2Q0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim29Q8R2Q0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Trim29Q8R2Q0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim29Q8R2Q0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim29Q8R2Q0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim29Q8R2Q0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.01■□□□□ 0.63
Trim29Q8R2Q0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim29Q8R2Q0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19■□□□□ 0.63
Trim29Q8R2Q0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim29Q8R2Q0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim29Q8R2Q0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms