Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn1Q8K0T0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn1Q8K0T0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn1Q8K0T0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Gm11336-201ENSMUST00000118168 334 ntBASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn1Q8K0T0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn1Q8K0T0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn1Q8K0T0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms