Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.88□□□□□ -0.03
ShfQ8CG80 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.88□□□□□ -0.03
ShfQ8CG80 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.88□□□□□ -0.03
ShfQ8CG80 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.88□□□□□ -0.03
ShfQ8CG80 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ShfQ8CG80 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
ShfQ8CG80 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.87□□□□□ -0.03
ShfQ8CG80 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ShfQ8CG80 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ShfQ8CG80 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ShfQ8CG80 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
ShfQ8CG80 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ShfQ8CG80 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ShfQ8CG80 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ShfQ8CG80 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.86□□□□□ -0.03
ShfQ8CG80 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.86□□□□□ -0.03
ShfQ8CG80 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.86□□□□□ -0.03
ShfQ8CG80 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ShfQ8CG80 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ShfQ8CG80 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Gm15039-201ENSMUST00000118914 875 ntBASIC14.85□□□□□ -0.03
ShfQ8CG80 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Gm7791-201ENSMUST00000219066 539 ntBASIC14.85□□□□□ -0.03
ShfQ8CG80 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Timm23-208ENSMUST00000226683 750 ntBASIC14.85□□□□□ -0.03
ShfQ8CG80 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.85□□□□□ -0.03
ShfQ8CG80 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShfQ8CG80 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ShfQ8CG80 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ShfQ8CG80 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.84□□□□□ -0.03
ShfQ8CG80 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms