Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Smco1Q8CEZ1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco1Q8CEZ1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Gm12821-201ENSMUST00000120022 600 ntBASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.27■□□□□ 0.04
Smco1Q8CEZ1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco1Q8CEZ1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco1Q8CEZ1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco1Q8CEZ1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms