Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc28aQ8CEI3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc28aQ8CEI3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc28aQ8CEI3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc28aQ8CEI3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc28aQ8CEI3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28aQ8CEI3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28aQ8CEI3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28aQ8CEI3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28aQ8CEI3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc28aQ8CEI3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms