Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Gm36967-201ENSMUST00000193814 266 ntBASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim52Q8CDV4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Gm18195-201ENSMUST00000207604 706 ntBASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Rarb-207ENSMUST00000225921 2756 ntBASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Trim52Q8CDV4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Gm7862-201ENSMUST00000121461 292 ntBASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.53■□□□□ 0.88
Trim52Q8CDV4 AW822252-206ENSMUST00000208904 237 ntBASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim52Q8CDV4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim52Q8CDV4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Trim52Q8CDV4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim52Q8CDV4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim52Q8CDV4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Gm18733-201ENSMUST00000173950 856 ntBASIC20.51■□□□□ 0.87
Trim52Q8CDV4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Gm6376-201ENSMUST00000209407 580 ntBASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trim52Q8CDV4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim52Q8CDV4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim52Q8CDV4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim52Q8CDV4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Trim52Q8CDV4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms