Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc46a2Q8CA03 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc46a2Q8CA03 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Gm11249-201ENSMUST00000117071 859 ntBASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Gm42545-201ENSMUST00000202755 922 ntBASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc46a2Q8CA03 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Gm10517-202ENSMUST00000192970 758 ntBASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Gm37025-201ENSMUST00000195159 829 ntBASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc46a2Q8CA03 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc46a2Q8CA03 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc46a2Q8CA03 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc46a2Q8CA03 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Slc46a2Q8CA03 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc46a2Q8CA03 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc46a2Q8CA03 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Slc46a2Q8CA03 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms