Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Gm13186-201ENSMUST00000118031 316 ntBASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ptcd1Q8C2E4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptcd1Q8C2E4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Rprl3-201ENSMUST00000157400 290 ntBASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Phf7-203ENSMUST00000226565 1971 ntBASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ptcd1Q8C2E4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Gm5364-201ENSMUST00000216789 889 ntBASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptcd1Q8C2E4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Gm27000-201ENSMUST00000182943 842 ntBASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptcd1Q8C2E4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptcd1Q8C2E4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms