Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ska3Q8C263 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ska3Q8C263 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Actl10-202ENSMUST00000226583 1501 ntBASIC15.68■□□□□ 0.1
Ska3Q8C263 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ska3Q8C263 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ska3Q8C263 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.68■□□□□ 0.1
Ska3Q8C263 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ska3Q8C263 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.67■□□□□ 0.1
Ska3Q8C263 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Ska3Q8C263 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.67■□□□□ 0.1
Ska3Q8C263 Gm22697-201ENSMUST00000175194 63 ntBASIC15.67■□□□□ 0.1
Ska3Q8C263 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.67■□□□□ 0.1
Ska3Q8C263 Gm18101-201ENSMUST00000215769 548 ntBASIC15.67■□□□□ 0.1
Ska3Q8C263 Gm18032-201ENSMUST00000222541 538 ntBASIC15.67■□□□□ 0.1
Ska3Q8C263 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ska3Q8C263 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ska3Q8C263 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ska3Q8C263 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ska3Q8C263 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ska3Q8C263 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Gm27389-201ENSMUST00000183622 195 ntBASIC15.66■□□□□ 0.1
Ska3Q8C263 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ska3Q8C263 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.66■□□□□ 0.1
Ska3Q8C263 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ska3Q8C263 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ska3Q8C263 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ska3Q8C263 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ska3Q8C263 Gm10013-201ENSMUST00000106074 672 ntBASIC15.65■□□□□ 0.1
Ska3Q8C263 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ska3Q8C263 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms